netbooks is a Jupyter notebook tutorial server that hosts several uses case of the Network Zoo tools.
Please prepare your tutorial as an Python/R Jupyter notebook.
Make sure to:
Avoid saving files on disk
Avoid making systems calls to create folders or call other programs such as os.system( someBashCommand )
Include substantial documentation of the code and illustrate the use cases with biological/theoretical motivation in the introduction and main takeaway in the conclusion
Always include the package loading call in the beginning of each tutorial and the references at the end
Avoid setting working directories using setwd()/os.chdir() and instead refer to files by their relative paths
Each new contribution should include:
An introduction that describes the problem at a higher level
Description of input data files and providing links to their original sources
Descriptipon of the results and how to interpret them.
Please open a new pull request at the netbooks GitHub repo and push the .ipynb file.
Then, the server will fetch the new changes periodically and the tutorial will be displayed in the server.