Example of mutation data

Somatic mutations of Uterine Corpus Endometrial Carcinoma from The Cancer Genome Atlas. Data were downloaded and pre-processed as described in Kuijjer et al.

This data is a toy example data for SAMBAR, it contains gene annotations

Usage

data(mut.ucec)

data(mut.ucec)

Format

A table with 248 rows and 19754 columns

A binary dataframe where 1 indicates a mutation and 0 otherwise.

Value

A table of 19754 genes by 248 samples

References

Kuijjer, Marieke Lydia, et al. "Cancer subtype identification using somatic mutation data." British journal of cancer 118.11 (2018): 1492-1501.