Filter samples

Filter samples

Usage

filterSamples(obj, ids, groups = colnames(obj), keepOnly = FALSE)

Arguments

obj

ExpressionSet object.

ids

Names found within the groups labels corresponding to samples to be removed

groups

Vector of labels for each sample or a column name of the phenoData slot for the ids to filter. Default is the column names.

keepOnly

Filter or keep only the samples with those labels.

Value

Filtered ExpressionSet object

Examples

data(skin)
filterSamples(skin,ids = "Skin - Not Sun Exposed (Suprapubic)",groups="SMTSD")
filterSamples(skin,ids=c("GTEX-OHPL-0008-SM-4E3I9","GTEX-145MN-1526-SM-5SI9T"))